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Sessions for Friday, July 29th, 2016
MorningEX1
AfternoonRG1
Sessions for Saturday, July 30th, 2016
MorningBR01BR02RG2FT03FT12FT01EX2FT04
EveningM02
Sessions for Sunday, July 31st, 2016
MorningBR03RG3FT05M04SP1WS01WS02WS03WS04WS05WS06WS07WS20FT07M03EX3FT09FT11M05WS08WS09WS10WS10AM07M09
AfternoonPP1M08WS11WS12WS13WS14M10BR04M12WS15M13M37BQ1M14M36WS16M15M16
EveningM38S2EX4MX1
Sessions for Monday, August 1st, 2016
MorningBR05BR06BR07BR08M17PP2RG4123SY01576SY028BR09EX5S3
AfternoonL1L2L3L4M18M191011129C1D4SY03SY041314D1M21PR1
EveningBQ2M22M23R2R3MX2
Sessions for Tuesday, August 2nd, 2016
MorningBR10BR11PP3RG515161718192021SY05SY062223M06EX6BR072425M24S4
AfternoonM25S5262728293031C2SY07SY083233M26BR08S634R4M27M28M29M30
EveningBQ3MX3BQ4
Sessions for Wednesday, August 3rd, 2016
MorningBR12BR13BR14BR15M31PP4RG635363738394041C3SY09SY10EX7BR0942S7
AfternoonEX8L5L64344454647C4D2D3L7SY1148S8BR10M324950R5S9M34M33
EveningR6
Sessions for Thursday, August 4th, 2016
MorningM35SY12

Presentations for Session 1

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OrderDate/TimeTitleSection/TopicTypeAuthorsKeywords
Monday, August 1st
8:00 am to 11:45 am · 101/Savannah International Trade and Convention Center
Session 1: Contributed Papers: Phylogenomics: Phylogenomics I
Presiding: Elizabeth Zimmer, Smithsonian Institution, National Museum of Natural History; Michael D. Martin, University Museum
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1001August 1st 8:00 amGenotyping by sequencing in a 'spiny' species complex of Australian arid zone grasses (Triodia)
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PhylogenomicsOral PaperAnderson, Benjamin; Grierson, Pauline; Krauss, Siegfried; Thiele, Kevin; Barrett, Matthew.ASTRAL
Australia
Genotyping by sequencing (GBS)
PyRAD
Species complex
Triodia
1002August 1st 8:15 amPhylogenetic relationships of Burmeistera (Campanulaceae)—using high-throughput sequencing to improve resolution in a recent radiation
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PhylogenomicsOral PaperUribe-Convers, Simon; Carlsen, Monica; Lagomarsino, Laura; Knox, Eric; Muchhala, Nathan C..phylogenomics
Plastome
Capture Probes
Chloroplast Genome
genome skimming
species tree
Coalescence
High-Throughput Sequencing 
phylogenetics
Next generation sequencing
Campanulaceae
Burmeistera
1003August 1st 8:30 amPhylogenomics of the Phaseoloid legumes: an introduction
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PhylogenomicsOral PaperVatanparast, Mohammad; Powell, Adrian; Sherman-Broyles, Sue; Doyle, Jane; Doyle, Jeff; Egan, Ashley N..phylogenomics
legumes
Transcriptome
polyploidy
RNA-seq
Beans
1004August 1st 8:45 amSeeing the Protea for the (gene) trees: anchored phylogenomics resolves relationships in a rapid radiation
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PhylogenomicsOral PaperMitchell, Nora; Lewis, Paul; Lemmon, Emily; Lemmon, Alan R.; Holsinger, Kent.anchored phylogenomics
Coalescence
phylogenetics
Proteaceae
radiation
1005August 1st 9:00 amA phylogeographic approach to assessing plastid genome evolution in a non-photosynthetic orchid using targeted sequence capture
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PhylogenomicsOral PaperBarrett, Craig; Sass, Chodon.Plastome
Next generation sequencing
phylogenomics
intraspecific variation
pseudogene
mycoheterotrophic
Orchidaceae
sequence capture
plastid
chloroplast
genome evolution
1006August 1st 9:15 amDNA sequences identify cryptic species of quillworts (Isoetes L.)
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PhylogenomicsOral PaperZimmer, Elizabeth; Taylor, W. Carl; Schafran, Peter; Johnson, Gabriel.Isoetes
tetraploids
low-copy nuclear markers
Chloroplast Genome
Next generation sequencing
1007August 1st 9:30 amHitting the century mark in an understudied, hyper-diverse lineage: Transcriptome-based phylogenomic analyses across the diatoms (Bacillariophyta)
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PhylogenomicsOral PaperParks, Matthew; Johnson, Matthew; Ruck, Elizabeth; Alverson, Andrew; Wickett, Norm.diatom
phylogenomics
Transcriptome
orthology
1008August 1st 9:45 amBreak
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Phylogenomics
1009August 1st 10:15 amMultilocus phylogenetics of Pinus subsection Australes
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PhylogenomicsOral PaperGernandt, David S.; Aguirre, Xitlali; Vázquez Lobo, Alejandra; Willyard, Ann; Moreno, Alejandra; Jaramillo Correa, Juan Pablo; Piñero, Daniel; Liston, Aaron.Coalescence
mtDNA
low-copy nuclear markers
pine
Plastome
1010August 1st 10:30 amA pilot study applying the Plant Anchored Hybrid Enrichment method to New World sages (Salvia subgenus Calosphace; Lamiaceae)
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PhylogenomicsOral PaperFragoso-Martínez, Itzi; Salazar, Gerardo A.; Martí­nez-Gordillo, Martha; Magallón, Susana; Lemmon, Alan R.; Moriarty Lemmon, Emily; Moreno-Letelier, Alejandra; Granados Mendoza, Carolina.anchored phylogenomics
Lamiales
Lamiaceae
Salvia
Calosphace
1011August 1st 10:45 amEnhanced phylogenetic resolution of the highly-diverse Neotropical genus Epidendrum (Orchidaceae) using Anchored Hybrid Enrichment
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PhylogenomicsOral PaperGranados Mendoza, Carolina; Salazar, Gerardo A.; Hagsater, Eric; van der Berg, Cassio; Magallón, Susana; Moriarty Lemmon, Emily; Lemmon, Alan R..Epidendrum
Orchidaceae
anchored phylogenomics
Genomic Partitioning Strategies
1012August 1st 11:00 amEvaluating the impact of genomic data and priors on Bayesian estimates of the angiosperm evolutionary timescale
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PhylogenomicsOral PaperFoster, Charles; Sauquet, Herve; van der Merwe, Marlien; McPherson, Hannah; Rossetto, Maurizio; Ho, Simon.Angiospermae
chloroplast
genome
Molecular dating
Triassic
phylogenomics
1013August 1st 11:15 amMitochondrial phylogenomics of mycoheterotrophic lineages of monocots
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PhylogenomicsOral PaperLin, Qianshi; Lam, Vivienne K. Y.; Gomez, Marybel Soto; Marques, Isabel; Merckx, Vincent; Graham, Sean W..mitochondrial genome
higher-order classification
mycoheterotrophic plants
mycoheterotrophy
Pandanales
Petrosaviales
Dioscoreales
Burmanniaceae
Thismiaceae
1014August 1st 11:30 amPhylogenomics and transcriptomics of Galápagos daisy trees (Scalesia)
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PhylogenomicsOral PaperMartin, Michael D.; Wales, Nathan; Madrigal, Jazmí­n R.; Hansen, Anders J.; Mundy, John; Petersen, Gitte; Seberg, Ole; Gilbert, M. Thomas P..Scalesia
phylogenetics
phylogenomics
Genomics
comparative genomics

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