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Sessions for Friday, July 29th, 2016
MorningEX1
AfternoonRG1
Sessions for Saturday, July 30th, 2016
MorningBR01BR02RG2FT03FT12FT01EX2FT04
EveningM02
Sessions for Sunday, July 31st, 2016
MorningBR03RG3FT05M04SP1WS01WS02WS03WS04WS05WS06WS07WS20FT07M03EX3FT09FT11M05WS08WS09WS10WS10AM07M09
AfternoonPP1M08WS11WS12WS13WS14M10BR04M12WS15M13M37BQ1M14M36WS16M15M16
EveningM38S2EX4MX1
Sessions for Monday, August 1st, 2016
MorningBR05BR06BR07BR08M17PP2RG4123SY01576SY028BR09EX5S3
AfternoonL1L2L3L4M18M191011129C1D4SY03SY041314D1M21PR1
EveningBQ2M22M23R2R3MX2
Sessions for Tuesday, August 2nd, 2016
MorningBR10BR11PP3RG515161718192021SY05SY062223M06EX6BR072425M24S4
AfternoonM25S5262728293031C2SY07SY083233M26BR08S634R4M27M28M29M30
EveningBQ3MX3BQ4
Sessions for Wednesday, August 3rd, 2016
MorningBR12BR13BR14BR15M31PP4RG635363738394041C3SY09SY10EX7BR0942S7
AfternoonEX8L5L64344454647C4D2D3L7SY1148S8BR10M324950R5S9M34M33
EveningR6
Sessions for Thursday, August 4th, 2016
MorningM35SY12

Presentations for Session C4

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OrderDate/TimeTitleSection/TopicTypeAuthorsKeywords
Wednesday, August 3rd
1:30 pm to 5:45 pm · Chatham Ballroom - C/Savannah International Trade and Convention Center
Session C4: Colloquium: Seed-free Plants at the Genomic Scale: Seed Free Plants at the Genomic Scale
Presiding: Matthew Johnson, Chicago Botanic Garden; Erin Sigel, Smithsonian Institution
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C4001August 3rd 1:30 pmBuilding a comprehensive evolutionary history of flagellate plants
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Seed-free Plants at the Genomic ScaleColloquium PresentationsSessa, Emily Butler; McDaniel, Stuart F.; Davis, E. Christine; Antonenko, Pavlo; von Konrat, Matt; Gaus, Eve; Cui, Hong; Burleigh, Gordon.ferns
lycophytes
Bryophytes
gymnosperms
phylogenomics
Genomics
phylogenetics
C4002August 3rd 1:45 pmA comparison of chloroplast and mitochondrial genomes within a family of green algae
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Seed-free Plants at the Genomic ScaleColloquium PresentationsMcManus, Hilary A.Chlorophyceae
Sphaeropleales
phylogenomics
chloroplast
Mitochondria
green algae
C4003August 3rd 2:00 pmFood vs. photons: The genomics of a green alga that eats bacteria
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Seed-free Plants at the Genomic ScaleColloquium PresentationsBurns, John; Paasch, Amber; Narechania, Apurva; Kim, Eunsoo.mixotrophy
green algae
Genomics
prasinophyte
Cymbomonas
C4004August 3rd 2:15 pmComparative studies of prasinophyte chloroplast genomes
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Seed-free Plants at the Genomic ScaleColloquium PresentationsSatjarak, Anchittha; Graham, Linda E..
C4005August 3rd 2:30 pmResolving the backbone phylogeny of mosses, using targeted NGS data from plastid, mitochondrial and nuclear genomes
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Seed-free Plants at the Genomic ScaleColloquium PresentationsLiu, Yang; Johnson, Matthew; Rafael, Medina; Nicolas, Devos; Wickett, Norm; Shaw, A Jonathan; Goffinet, Bernard.phylogenomics
moss
plastid
Mitochondrial
Nuclear
Targeted NGS
C4006August 3rd 2:45 pmCharacterizing the Sphagnum-microbiome: From natural surveys to manipulation studies
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Seed-free Plants at the Genomic ScaleColloquium PresentationsCarrell, Alyssa; Kolton, Max; Kostka, Joel; Glass, Jennifer; Shaw, A Jonathan; Weston, David J.Sphagnum
microbiome
phytobiome
bacterial symbionts
Genomics
C4007August 3rd 3:00 pmZooming in on the rapid radiation of the Funariaceae
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Seed-free Plants at the Genomic ScaleColloquium PresentationsMedina, Rafael; Johnson, Matthew; Liu, Yang; Budke, Jessica; Wilding, Nicholas; Hedderson, Terry; Wickett, Norm; Goffinet, Bernard.phylogenomics
Bryophytes
phylogeny
Mosses
NGS
C4008August 3rd 3:15 pmMetatranscriptomic analysis of the moss Dicranum scoparium reveals active fungal communities and functionalities across a senescence gradient
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Seed-free Plants at the Genomic ScaleColloquium PresentationsChen, Ko-Hsuan; Liao, Hui-Ling; Arnold, A. Elizabeth; Lutzoni, Francois.metatranscriptome
fungi
moss
Dicranum scoparium
Symbiosis
C4009August 3rd 3:30 pmBreak
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Seed-free Plants at the Genomic Scale
C4010August 3rd 3:45 pmUncovering the evolutionary history of the dung moss Tetraplodon fuegianus: A comparison of Sanger, organellar genomic, and RADseq datasets
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Seed-free Plants at the Genomic ScaleColloquium PresentationsLewis, Lily R.; Liu, Yang; Rozzi, Ricardo; Goffinet, Bernard.RADseq
Bryophyte
phylogenomics
intraspecific variation
C4011August 3rd 4:00 pmA re-evaluation of ancient horizontal gene transfer in bryophytes using comparative transcriptome data
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Seed-free Plants at the Genomic ScaleColloquium PresentationsJohnson, Matthew; Goffinet, Bernard; Shaw, A Jonathan; Wickett, Norm.phylogenomics
moss
HGT
Gene tree
genome evolution
C4012August 3rd 4:15 pmConsistently inconsistent: Transcriptome data reveal widespread molecular evolutionary rate asymmetry in ferns
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Seed-free Plants at the Genomic ScaleColloquium PresentationsGrusz, Amanda; Schuettpelz, Eric.Adiantum
GO enrichment
Molecular evolution
Substitution rates
vittarioid
C4013August 3rd 4:30 pmPhase-Specific Gene Expression in the Homosporous Fern Polypodium amorphum
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Seed-free Plants at the Genomic ScaleColloquium PresentationsSigel, Erin; Schuettpelz, Eric; Der, Joshua.sporophyte
gametophyte
gene expression
pteridophyte
RNA-seq
C4014August 3rd 4:45 pmGene evolution and specificity underlying the alternation of independent generations in Ceratopteris richardii
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Seed-free Plants at the Genomic ScaleColloquium PresentationsMarchant, Blaine; Barbazuk, William B.; Kirst, Matias; Sessa, Emily Butler; Soltis, Pamela  S.; Soltis, Douglas E.alternation of generations
gene evolution
life cycles
Transcriptomics
C4015August 3rd 5:00 pmThe genome and annotation of Azolla filiculoides
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Seed-free Plants at the Genomic ScaleColloquium PresentationsDer, Joshua P.; Koppers, Nils; Simenc, Mathew; Cheng, Shifeng; Liu, Xin; Wong, Gane Ka-Shu; Brautigam, Andrea; Schluepmann, Henriette; Pryer, Kathleen; Li, Fay-Wei.fern
genome
transposon
de novo assembly
Transcriptome
heterospory
evolution
C4016August 3rd 5:15 pmInsider trading: Understanding nutrient exchange in the Azolla-Nostoc symbiosis
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Seed-free Plants at the Genomic ScaleColloquium PresentationsEily, Ariana; Li, Fay-Wei; Gile, Gillian; Pryer, Kathleen.Symbiosis
ferns
N-fixing cyanobacteria
C4017August 3rd 5:30 pmFern genomes on the horizon
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Seed-free Plants at the Genomic ScaleColloquium PresentationsLi, Fay-Wei.ferns
Azolla
Salvinia
genome

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