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American Bryological and Lichenological Society (ABLS)
American Fern Society (AFS)
American Society of Plant Taxonomists (ASPT)
Botanical Society of America (BSA)
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International Association for Plant Taxonomy (IAPT)
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Mycological Section (MSA)

Presentations for Program:: Seed-free Plants at the Genomic Scale

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SessionDate/TimeLocationTitleTypeAuthorsKeywords

Wednesday, August 3rd

Wednesday, August 3rd, 1:30 pm to 5:45 pm · Chatham Ballroom - C/Savannah International Trade and Convention Center
Session C4: Colloquium: Seed Free Plants at the Genomic Scale
Presiding: Matthew Johnson, Chicago Botanic Garden; Erin Sigel, Smithsonian Institution
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C4001August 3rd 1:30 pmChatham Ballroom - C/Savannah International Trade and Convention CenterBuilding a comprehensive evolutionary history of flagellate plants
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Colloquium PresentationsSessa, Emily Butler; McDaniel, Stuart F.; Davis, E. Christine; Antonenko, Pavlo; von Konrat, Matt; Gaus, Eve; Cui, Hong; Burleigh, Gordon.ferns
lycophytes
Bryophytes
gymnosperms
phylogenomics
Genomics
phylogenetics
C4002August 3rd 1:45 pmChatham Ballroom - C/Savannah International Trade and Convention CenterA comparison of chloroplast and mitochondrial genomes within a family of green algae
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Colloquium PresentationsMcManus, Hilary A.Chlorophyceae
Sphaeropleales
phylogenomics
chloroplast
Mitochondria
green algae
C4003August 3rd 2:00 pmChatham Ballroom - C/Savannah International Trade and Convention CenterFood vs. photons: The genomics of a green alga that eats bacteria
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Colloquium PresentationsBurns, John; Paasch, Amber; Narechania, Apurva; Kim, Eunsoo.mixotrophy
green algae
Genomics
prasinophyte
Cymbomonas
C4004August 3rd 2:15 pmChatham Ballroom - C/Savannah International Trade and Convention CenterComparative studies of prasinophyte chloroplast genomes
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Colloquium PresentationsSatjarak, Anchittha; Graham, Linda E..
C4005August 3rd 2:30 pmChatham Ballroom - C/Savannah International Trade and Convention CenterResolving the backbone phylogeny of mosses, using targeted NGS data from plastid, mitochondrial and nuclear genomes
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Colloquium PresentationsLiu, Yang; Johnson, Matthew; Rafael, Medina; Nicolas, Devos; Wickett, Norm; Shaw, A Jonathan; Goffinet, Bernard.phylogenomics
moss
plastid
Mitochondrial
Nuclear
Targeted NGS
C4006August 3rd 2:45 pmChatham Ballroom - C/Savannah International Trade and Convention CenterCharacterizing the Sphagnum-microbiome: From natural surveys to manipulation studies
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Colloquium PresentationsCarrell, Alyssa; Kolton, Max; Kostka, Joel; Glass, Jennifer; Shaw, A Jonathan; Weston, David J.Sphagnum
microbiome
phytobiome
bacterial symbionts
Genomics
C4007August 3rd 3:00 pmChatham Ballroom - C/Savannah International Trade and Convention CenterZooming in on the rapid radiation of the Funariaceae
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Colloquium PresentationsMedina, Rafael; Johnson, Matthew; Liu, Yang; Budke, Jessica; Wilding, Nicholas; Hedderson, Terry; Wickett, Norm; Goffinet, Bernard.phylogenomics
Bryophytes
phylogeny
Mosses
NGS
C4008August 3rd 3:15 pmChatham Ballroom - C/Savannah International Trade and Convention CenterMetatranscriptomic analysis of the moss Dicranum scoparium reveals active fungal communities and functionalities across a senescence gradient
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Colloquium PresentationsChen, Ko-Hsuan; Liao, Hui-Ling; Arnold, A. Elizabeth; Lutzoni, Francois.metatranscriptome
fungi
moss
Dicranum scoparium
Symbiosis
August 3rd 3:30 pmChatham Ballroom - C/Savannah International Trade and Convention CenterBreak
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C4010August 3rd 3:45 pmChatham Ballroom - C/Savannah International Trade and Convention CenterUncovering the evolutionary history of the dung moss Tetraplodon fuegianus: A comparison of Sanger, organellar genomic, and RADseq datasets
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Colloquium PresentationsLewis, Lily R.; Liu, Yang; Rozzi, Ricardo; Goffinet, Bernard.RADseq
Bryophyte
phylogenomics
intraspecific variation
C4011August 3rd 4:00 pmChatham Ballroom - C/Savannah International Trade and Convention CenterA re-evaluation of ancient horizontal gene transfer in bryophytes using comparative transcriptome data
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Colloquium PresentationsJohnson, Matthew; Goffinet, Bernard; Shaw, A Jonathan; Wickett, Norm.phylogenomics
moss
HGT
Gene tree
genome evolution
C4012August 3rd 4:15 pmChatham Ballroom - C/Savannah International Trade and Convention CenterConsistently inconsistent: Transcriptome data reveal widespread molecular evolutionary rate asymmetry in ferns
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Colloquium PresentationsGrusz, Amanda; Schuettpelz, Eric.Adiantum
GO enrichment
Molecular evolution
Substitution rates
vittarioid
C4013August 3rd 4:30 pmChatham Ballroom - C/Savannah International Trade and Convention CenterPhase-Specific Gene Expression in the Homosporous Fern Polypodium amorphum
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Colloquium PresentationsSigel, Erin; Schuettpelz, Eric; Der, Joshua.sporophyte
gametophyte
gene expression
pteridophyte
RNA-seq
C4014August 3rd 4:45 pmChatham Ballroom - C/Savannah International Trade and Convention CenterGene evolution and specificity underlying the alternation of independent generations in Ceratopteris richardii
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Colloquium PresentationsMarchant, Blaine; Barbazuk, William B.; Kirst, Matias; Sessa, Emily Butler; Soltis, Pamela  S.; Soltis, Douglas E.alternation of generations
gene evolution
life cycles
Transcriptomics
C4015August 3rd 5:00 pmChatham Ballroom - C/Savannah International Trade and Convention CenterThe genome and annotation of Azolla filiculoides
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Colloquium PresentationsDer, Joshua P.; Koppers, Nils; Simenc, Mathew; Cheng, Shifeng; Liu, Xin; Wong, Gane Ka-Shu; Brautigam, Andrea; Schluepmann, Henriette; Pryer, Kathleen; Li, Fay-Wei.fern
genome
transposon
de novo assembly
Transcriptome
heterospory
evolution
C4016August 3rd 5:15 pmChatham Ballroom - C/Savannah International Trade and Convention CenterInsider trading: Understanding nutrient exchange in the Azolla-Nostoc symbiosis
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Colloquium PresentationsEily, Ariana; Li, Fay-Wei; Gile, Gillian; Pryer, Kathleen.Symbiosis
ferns
N-fixing cyanobacteria
C4017August 3rd 5:30 pmChatham Ballroom - C/Savannah International Trade and Convention CenterFern genomes on the horizon
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Colloquium PresentationsLi, Fay-Wei.ferns
Azolla
Salvinia
genome

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